AlloViz.Wrappers

Wrappers of AlloViz’s network construction methods/packages

Each module contains the class(es) that wrap the code of a package used by AlloViz as a network construction method. They are used to send their calculations through the AlloViz code without needing to execute them independently, and process their results to store them in AlloViz objects. They are child classes of Base module’s Base class and other classes therein (by multiple inheritance).

Modules

AlloViz.Wrappers.AlloViz_w	AlloViz's own network construction method wrapper
AlloViz.Wrappers.Base	Base module for package/software wrapping for AlloViz
AlloViz.Wrappers.CARDS_w	CARDS network construction method wrapper
AlloViz.Wrappers.GSAtools	GSAtools wrapper
AlloViz.Wrappers.GetContacts(protein, d)	GetContacts' contact frequencies
AlloViz.Wrappers.MDEntropy_w	MDEntropy wrapper
AlloViz.Wrappers.MDTASK(protein, d)	MD-TASK's Pearson's correlation of CA atoms
AlloViz.Wrappers.PyInteraph2_w	PyInteraph2 wrapper
AlloViz.Wrappers.correlationplus_w	correlationplus wrapper
AlloViz.Wrappers.dynetan_w	dynetan wrapper
AlloViz.Wrappers.g_correlation_w	g_correlation wrapper
AlloViz.Wrappers.pytraj_w	pytraj wrapper