AlloViz.AlloViz.Filtering

Module with classes to filter and store networks

Functions of the module (and/or combinations of them) are used for filtering the passed raw networks with the main class Filtering.

Functions

All(pkg, data, **kwargs)	No filtering
GPCR_Interhelix(pkg, data, **kwargs)	Retain only edges between different TMs(/ECLs/ICLs) of GPCRs
GetContacts_edges(pkg, data, ...)	Retain only edges found by GetContacts
No_Sequence_Neighbors(pkg, data, ...)	Filter out residue pairs too close in the sequence
Spatially_distant(pkg, data, ...)	Retain only edges between spatially distant residue pairs

Classes

Filtering(pkg, filtering, name, *[, ...])

Class for network filtering

Exceptions

NoNetworkException