AlloViz.Wrappers.AlloViz_w#

AlloViz’s own network construction method wrapper

It calculates the Mutual Information (MI) generalized correlation of the residues’ dihedral angles and also their combinations.

Classes

AlloViz_Backbone_Dihs(protein, d)

AlloViz network construction method's of the combination of the backbone dihedrals' MIs by averaging

AlloViz_Base(protein, d)

AlloViz network construction method base class

AlloViz_Chi1(protein, d)

AlloViz network construction method's MI of Chi1 side-chain dihedral

AlloViz_Chi2(protein, d)

AlloViz network construction method's MI of Chi2 side-chain dihedral

AlloViz_Chi3(protein, d)

AlloViz network construction method's MI of Chi3 side-chain dihedral

AlloViz_Chi4(protein, d)

AlloViz network construction method's MI of Chi4 side-chain dihedral

AlloViz_Dihs(protein, d)

AlloViz network construction method's of the combination of all backbone and side-chain dihedrals' MIs by averaging

AlloViz_Phi(protein, d)

AlloViz network construction method's MI of Phi backbone dihedral

AlloViz_Psi(protein, d)

AlloViz network construction method's MI of Psi backbone dihedral

AlloViz_Sidechain_Dihs(protein, d)

AlloViz network construction method's of the combination of the side-chain dihedrals' MIs by averaging